BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A11LP1|AL430162
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1602 1763 0.0
>3x_Contig1602
Length = 12694
Score = 1763 bits (886), Expect = 0.0
Identities = 908/916 (99%), Gaps = 2/916 (0%)
Strand = Plus / Minus
Query: 1 gatcaagcttcggcagcactacacgatcatcagtcgctgtaacgttagtcgtggtatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10869 gatcaagcttcggcagcactacacgatcatcagtcgctgtaacgttagtcgtggtatcaa 10810
Query: 61 agagctcatttctcgaaacaactctcaaaccagacatgattgatttgttgagctttgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10809 agagctcatttctcgaaacaactctcaaaccagacatgattgatttgttgagctttgcaa 10750
Query: 121 ggtgttccttgakatgatgatgaaaagatacgcagattacatctcatctcctcgtatcgt 180
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10749 ggtgttcct-gagatgatgatgaaaagatacgcagattacatctcatctcctcgtatcgt 10691
Query: 181 catattttgactaactttttgatcttatatatacatgtatattttttttagcatattggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10690 catattttgactaactttttgatcttatatatacatgtatattttttttagcatattggc 10631
Query: 241 aataggtgtaagatgacagacagtcgaaagtagccacagatagtttgtaatgacaaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10630 aataggtgtaagatgacagacagtcgaaagtagccacagatagtttgtaatgacaaacat 10571
Query: 301 gtattcttatgttatacatatcacttgtgtaaggttgtgtgcaaagtaagattttgctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10570 gtattcttatgttatacatatcacttgtgtaaggttgtgtgcaaagtaagattttgctat 10511
Query: 361 ttcatggtttcaatatctacataaaaaatggtatgtacgcaacttggaagcaccttttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10510 ttcatggtttcaatatctacataaaaaatggtatgtacgcaacttggaagcaccttttaa 10451
Query: 421 acttacttcgagattcttgtcttcatgttttgtaagaattctctgtagttccagctgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10450 acttacttcgagattcttgtcttcatgttttgtaagaattctctgtagttccagctgttt 10391
Query: 481 tggaccttatcttcgaccaactgagatgcagtccataatcttagagaagcaacttccctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10390 tggaccttatcttcgaccaactgagatgcagtccataatcttagagaagcaacttccctg 10331
Query: 541 gcagaaggatggttcattggttcacttggtgaggcgcctctgacaatgtgcaaggttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10330 gcagaaggatggttcattggttcacttggtgaggcgcctctgacaatgtgcaaggttttg 10271
Query: 601 tagaagataacatcatcgtgttctcttatctttgtaataacattcctcactcttaggttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10270 tagaagataacatcatcgtgttctcttatctttgtaataacattcctcactcttaggttg 10211
Query: 661 aactcagtagcgtctaatagaggtagttcatttttaccaattggaatttccataatgtcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10210 aactcagtagcgtctaatagaggtagttcatttttaccaattggaatttccataatgtcc 10151
Query: 721 ggggttccaaacacgtctgtwacaagctctgggacagcatcaccgccaatccataagaac 780
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 10150 -gggttccaaacacgtctgtaacaagctctgggacagcatcaccgccaatccataagaac 10092
Query: 781 atgtccaatcctgtgtcgattaaatacagaccgtatctttccaataaagacgaggtgkag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10091 atgtccaatcctgtgtcgattaaatacagaccgtatctttccaataaagacgaggtggag 10032
Query: 841 ttaattggttgcgktagtacaatttcaccagtttcttcatcgggtagaccagcttcgtca 900
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10031 ttaattggttgcggtagtacaatttcaccagtttcttcatcgggaagaccagcttcgtca 9972
Query: 901 ggyatgtcatgtaagg 916
|| |||||||||||||
Sbjct: 9971 ggcatgtcatgtaagg 9956
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6915
Number of Sequences: 1807
Number of extensions: 6915
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)